RESEARCH SUMMARY
" My research focuses on understanding the dynamic molecular changes that occur during tumour progression and metastasis through liquid biopsy. Our ability to study tumour biology and uncover new approaches to prevent and treat cancer is limited because it relies on tissue from a biopsy, which carries several issues: inadequate sampling, rare but serious complications, and, importantly, the limitation of having one static picture of the tumour – thereby neglecting the dynamics of tumour evolution. To overcome these issues, my lab tracks tumour evolution through a liquid biopsy, a minimally invasive approach to monitor disease progression, recurrence and treatment response using a blood sample. Detection of circulating tumour cells, DNA and extracellular vesicles can contribute to early diagnosis and personalized management. Liquid biopsy can inform on the changing mutational status of the disease and help to guide therapy. My lab works towards identifying specific initiating and metastasis-promoting mutations that can track disease through ctDNA as a biomarker. We also study the contribution of EVs to cancer progression, and synthesize lipid nanoparticles to study EV behaviour and as a drug delivery system for anti-cancer therapy. " (Summary taken from https://rimuhc.ca/-/julia-burnier)
PUBLICATIONS SINCE 2019
Tsering T, Nadeau A, Rak J, Burnier JV. Analyzing Extracellular Vesicle-associated DNA Using Transmission Electron Microscopy at the Single EV-level. Current Protocols. 2024 November. doi:10.1002/cpz1.70047
Ferrier ST, Li M, Burnier JV. Azacytidine treatment affects the methylation pattern of genomic and cell-free DNA in uveal melanoma cell lines. BMC Cancer. 2024;24(1):1299. Published 2024 Oct 21. doi:10.1186/s12885-024-13037-4
Tsering T, Nadeau A, Wu T, Dickinson K, Burnier JV. Extracellular vesicle-associated DNA: ten years since its discovery in human blood. Cell Death & Disease, 2024 September.
Dickinson K, Sharma A, Venkata Agnihotram RK, Altuntur S, Park M, Meterissian S, Burnier JV. Circulating Tumor DNA and Survival in Metastatic Breast Cancer. JAMA Network 2024 September.
Nadeau A, Burnier JV. With >1000 authors, the updated “Minimum Information for Studies of Extracellular Vesicles” (MISEV) promotes rigor, reproducibility, and transparency in the liquid biopsy field. J Liquid Biopsy. 2024 June.
Su X, Brassard A, Bartolomucci A, Dhoparee-Doomah I, Qiu Q, Tsering T, Rohanizadeh R, Koufos O, Giannias B, Bourdeau F, Feng L, Messina-Pacheco J, Leo S, Sangwan V, Quail D, Tankel J, Spicer J, Burnier JV, Bailey SD, Ferri L, Cools-Lartigue J. Tumour extracellular vesicles induce neutrophil extracellular traps to promote lymph node metastasis. J Extracell Vesicles. 2023 Aug;12(8):e12341. doi: 10.1002/jev2.12341. PMID: 37563798.
Ferrier ST, Tsering T, Sadeghi N, Zeitouni A, Burnier JV Blood and saliva-derived ctDNA is a marker of residual disease after treatment and correlates with recurrence in human papillomavirus-associated head and neck cancer. Cancer Med. 2023 Aug 1. doi: 10.1002/cam4.6191. Epub ahead of print. PMID: 37526056.
Been T, Alakhtar B, Traboulsi H, Tsering T, Bartolomucci A, Heimbach N, Paoli S, Burnier J, Mann KK, Eidelman DH, Baglole CJ. Chronic low-level JUUL aerosol exposure causes pulmonary immunologic, transcriptomic, and proteomic changes. FASEB J. 2023 Feb;37(2):e22732. doi: 10.1096/fj.202201392R. PMID: 36694994.
Tsering T, Li M, Chen Y, Nadeau A, Laskaris A, Abdouh M, Bustamante P, Burnier JV. EV-ADD, a database for EV-associated DNA in human liquid biopsy samples. J Extracell Vesicles. 2022 Oct;11(10):e12270. doi: 10.1002/jev2.12270. PMID: 36271888.
Pessuti CL, Costa DF, Ribeiro KS, Abdouh M, Tsering T, Nascimento H, Commodaro AG, Marcos AAA, Torrecilhas AC, Belfort RN, Belfort R Jr, Burnier JV. Characterization of extracellular vesicles isolated from different liquid biopsies of uveal melanoma patients J Circ Biomark. 2022 Jun 27;11:36-47. doi: 10.33393/jcb.2022.2370. PMID: 35784590; PMCID: PMC9238429.
Abdouh M, Lu M, Chen Y, Goyeneche AA, Burnier JV, Burnier MN. Filtering blue light mitigates the deleterious effects induced by the oxidative stress in human retinal pigment epithelial cells. Experimental Eye Research 2022 Feb 5; doi: 10.1016/j.exer.2022.108978.
Alvarez PB, Laskaris A, Goyeneche AA, Chen Y, Telleria CM, Burnier JV. Anticancer effects of mifepristone on human uveal melanoma cells. Cancer Cell Int. 2021 Nov 17;21(1):607. doi: 10.1186/s12935-021-02306-y. PMID: 34789240; PMCID: PMC8597220.
López RR, Sánchez LM, Alazzam A, Burnier JV, Stiharu I, Nerguizian V. Numerical and Experimental Validation of Mixing Efficiency in Periodic Disturbance Mixers Micromachines (Basel). 2021 Sep 14;12(9):1102. doi: 10.3390/mi12091102. PMID: 34577745; PMCID: PMC8469598.
López RR, Ocampo I, Font de Rubinat PG, Sánchez LM, Alazzam A, Tsering T, Bergeron KF, Camacho-Léon S, Burnier JV, Mounier C, Stiharu I, Nerguizian V. Parametric Study of the Factors Influencing Liposome Physicochemical Characteristics in a Periodic Disturbance Mixer. Langmuir. 2021 Jul 7. doi: 10.1021/acs.langmuir.1c01005. Epub ahead of print. PMID: 34232664.
Bustamante P, Tsering T, Coblentz J, Mastromonaco C, Abdouh M, Fonseca C, Proença RP, Blanchard N, Dugé CL, Andujar RAS, Youhnovska E, Burnier MN, Callejo SA, Burnier JV. Circulating tumor DNA tracking through driver mutations as a liquid biopsy-based biomarker for uveal melanoma. J Exp Clin Cancer Res. 2021 Jun 16;40(1):196. doi: 10.1186/s13046-021-01984-w. PMID: 34134723.
López RR, G Font de Rubinat P, Sánchez LM, Tsering T, Alazzam A, Bergeron KF, Mounier C, Burnier JV, Stiharu I, Nerguizian V. The effect of different organic solvents in liposome properties produced in a periodic disturbance mixer: Transcutol®, a potential organic solvent replacement. Colloids Surf B Biointerfaces. 2021 Feb;198:111447. doi: 10.1016/j.colsurfb.2020.111447. Epub 2020 Nov 4. PMID: 33223347.
Ferrier ST, Burnier JV. Novel Methylation Patterns Predict Outcome in Uveal Melanoma. Life (Basel). 2020 Oct 20;10(10):E248. doi: 10.3390/life10100248. PMID: 33092094.
Tsering, T.; Laskaris, A.; Abdouh, M.; Bustamante, P.; Parent, S.; Jin, E.; Ferrier, S.T.; Arena, G.; Burnier, J.V. Uveal Melanoma-Derived Extracellular Vesicles Display Transforming Potential and Carry Protein Cargo Involved in Metastatic Niche Preparation. Cancers 2020, 12, 2923.
Jin E, Burnier JV. Liquid Biopsy in Uveal Melanoma: Are We There Yet?. Ocul Oncol Pathol 2020. doi: 10.1159/000508613
Bustamante P, Piquet L, Landreville S, Burnier JV. Uveal melanoma pathobiology: Metastasis to the liver. [published online ahead of print, 2020 May 22]. Semin Cancer Biol. 2020;S1044-579X(20)30099-7. doi:10.1016/j.semcancer.2020.05.003
Bustamante P, Miyamoto D, Goyeneche A, et al. Beta‐blockers exert potent anti‐tumor effects in cutaneous and uveal melanoma. Cancer Med. 2019;8(17):7265-7277. doi:10.1002/cam4.2594
OUR TEAM
Principle Investigator
Dr. Burnier pursued a PhD in molecular and cell biology at McGill University (Experimental Medicine). The focus of her PhD was the molecular mechanisms underlying invasion and metastasis. Dr. Burnier went on to pursue related post-doctoral training at McGill and at the Centre for Genomic Regulation (Barcelona, Spain). Most recently, she focused on cancer genomics in clinical trials at the Princess Margaret Hospital (Toronto).
In 2018, Dr. Burnier began an independent research program within the Cancer Research Program (CRP) of the Research Institute of the McGill University Health Centre (RI-MUHC) to uncover the role and mechanisms of tumor-derived (circulating) molecules in tumor progression and metastasis. Our goal is to develop novel accurate and sensitive biomarkers and identify new targeted therapeutic strategies. Using liquid biopsy samples and cell models, we investigate the role of circulating nucleic acids and tumour-derived extracellular vesicles (EVs) in mediating tumour metastasis via communication with and reprograming of the tumor microenvironment.
Postdoctoral Fellow
Noélie holds a PhD in veterinary sciences (microbiology specialty) from the University of Montreal, and a double master's degree in science, biotechnology and health (infectious diseases) and in human and social sciences (management and e-learning) from the University of Montpellier (France). Throughout her academic career, Noélie has developed a sharp expertise in the field of parasitic infectious diseases, drug resistance, as well as molecular and cellular biology.
Her skills also extend to project management and scientific communication, essential assets to carry out high-level research. During her doctorate, she particularly focused on the role of extracellular vesicles (natural nanovectors), in the context of drug resistance. This experience laid the foundations for her current postdoctoral project, where she focuses on nanomedicine and more specifically on the development of lipid nanoparticles to improve the targeting and delivery of therapeutic mRNA, as part of innovative cancer therapies.
Postdoctoral Fellow
Monyse is a Biomedical Scientist with a Master’s and Ph.D in Genetics and Molecular Biology from the State University of Londrina, Brazil. During her graduate training, she focused on studying cell-free and extracellular vesicles microRNAs using liquid biopsy to identify biomarkers for early diagnosis and prognosis in prostate cancer, as well as the behavior of miRNAs in cell models (2D, 3D and organoids). Currently, she is a postdoctoral fellow in Dr. Julia Burnier's laboratory, evaluating circulating tumor DNA using liquid biopsy from colorectal cancer patients to assess cancer progression and response to treatment.
Postdoctoral Fellow
Alberto is an MD with a specialty in Clinical Pathology who obtained his Ph.D in Clinical Sciences at the Instituto Tecnológico y de Estudios Superiores de Monterrey with a focus in the area of regenerative medicine. In 2024 he joins the laboratory of Dr. Julia Burnier as a postdoctoral fellow focusing on the determination of ctDNA in patients with thyroid cancer.
PhD Student
Thupten graduated from McGill University in 2018 with a master of science in Biochemistry. He joined as a research assistant in Dr. Julia Burnier’s in October 2018. His research focuses on extracellular vesicles carrying oncogenes serve as a biomarker in cancer patients bio fluids. He is also interested in the molecular pathways of nucleic acid emission from cancer cells. Outside the lab, he likes hiking, travelling and playing soccer.
PhD Student
Tadhg obtained her B.Sc from McGill with a major in Pharmacology with a minor in Psychology. During her undergraduate degree, she did research at the MUHC-McGill Ocular Pathology and Translational Research Laboratory, working on metastasis markers in uveal melanoma, especially relating to the importance of BAP1 protein expression on the prognosis of patients. Following this work, she joined Dr. Julia Burnier’s laboratory, looking at Methylation Signatures in Uveal Melanoma using the TCGA database. Tadhg’s thesis involves methylation analysis and using liquid biopsy techniques for cancer detection and prognostication, specifically working on the detection of circulating tumor DNA in head and neck cancer and detecting methylation patterns in circulating tumor DNA.
PhD Student
Yunxi graduated from McGill University with a B.Sc. degree in Honours Computer Science and Biology. She joined Dr. Julia Burnier’s lab as a volunteer in her third year of undergrad, participated in analyzing the proteomics of extracellular vesicles of uveal melanoma and then started investigating cancer-stem cells in melanoma. She started as a MSc student in the lab from September 2020 and fast-tracked to PhD student. Her project mainly focuses on developing cellular models and synthetic nanoparticles to study uveal melanoma oncogenesis and metastasis.
PhD Student
Alexandra is a first year M.Sc. Student in Dr. Julia Burnier’s lab. She graduated from McGill University with a B.Sc. in Biochemistry in 2020. During her degree, she completed a research project on extracellular vesicles and their potential use as progression markers in esophageal cancer. After graduating, she worked for a year at a cancer research lab at the Montreal General Hospital, where she gained experience with patient-derived organoids. Alexandra is excited to begin her research project in Dr. Julia Burnier’s liquid biopsy lab which will incorporate circulating tumour DNA, extracellular vesicles, and organoids.
PhD Student
My name is Tad Wu and I am a newly admitted master's student in the Department of Pathology under the supervision of Dr. Julia Burnier. I earned my bachelor's in Honours Computer Science and Biology. During my undergrad, I was fortunate to be given the opportunity to conduct an honour's project under the supervision of Dr. Maria Vera Ugalde, where I used a computational pipeline to analyze the distribution and colocalization of heat shock protein mRNAs in neurons of ALS patients to determine if ALS would affect the heat shock response. After taking a class on human genetics, I became particularly interested in cancer. My project will aim to mimic cancer-derived extracellular vesicles (EVs) using lipid-based nanoparticles in terms of cellular uptake and downstream effects.
PhD Student
Nivedita earned her Bachelor of Dental Surgery in 2016 and completed her residency in Oral and Maxillofacial Pathology (2020) from Maharashtra University of Health Sciences, India. During her master's, she researched biomarkers in oral malignant and pre-malignant disorders. Her interest in translational research led her to pursue a Graduate Diploma in Oncology at McGill University, where she conducted a meta-analysis on the role of ctDNA in predicting survival outcomes in HPV-negative head and neck cancers (HNC) under Dr. Julia Burnier's supervision. As a PhD student in Dr. Burnier's lab, Nivedita's research focuses on ctDNA profiling in HPV(+) and HPV(-) HNCs, with a particular emphasis on developing and validating its clinical applications for real-time treatment response monitoring and early detection of minimal residual disease.
MSc Student
Erica received her Graduate Diploma in Oncology from the Gerald Bronfman Department at McGill University. She also completed her BSc at McGill, majoring in Honours Microbiology and Immunology. Since 2021, Erica has worked with co-supervisors Drs. Julia Burnier and Annie Leung on an HPV cervical cancer project to develop a minimally invasive liquid biopsy-based test that could predict patients' cancer risk and treatment response based on their levels of HPV-related circulating tumour (ct)DNA in blood, urine, vaginal swabs, and cervical cytology. Erica leads patient recruitment, the external validation of established ctDNA detection methods, and is exploring protein biomarkers, in addition to ctDNA, to assess their potential in cervical cancer screening and monitoring.
MSc Student
Yousra is a M.Sc. student in Dr. Julia Burnier’s lab and she graduated from McGill University, in 2024, with a B.Sc. in Microbiology & Immunology and a minor in Biotechnology. During her undergrad, she became a research intern in R&D at AstraZeneca where she developed a novel formulation for an antibody-drug conjugate protein, to abate photodegradation and achieve overall stability in solution. She also led a student-run project at McGill focusing on designing novel lipid nanoparticles (LNPs)-based gene therapies to treat hemophilia A. These projects, combined with relevant coursework, have guided her interests to Dr. Julia Burnier’s lab where she will engineer LNPs, using microfluidics, to mimic the functions of cancer-derived extracellular vesicles (EVs) for precision oncology applications.
LAB NEWS
Alumni
MSc Student (2022-2024)
Amelie has been helping the lab since July 2020 as a research trainee while she’s eager to start her second year of B.Sc in Biology - Physiology at Université de Montréal in the fall. She believes working on liquid biopsy research projects at Dr. Julia Burnier’s lab is a great opportunity to learn and assist on further developing our understanding and prediction of disease.
Undergraduate Student (2021-2023)
My name is Armen and I am currently completing my degree in Honors Biology. I joined the lab in the summer of 2022 working on encapsulating the small molecule calcein in liposomes and comparing the liposome production efficiency and encapsulation efficiency of different microfluidic mixers. For my Honors project, I am working on mimicking extracellular vesicles using liposomes to observe how their physicochemical characteristics affect cellular uptake.
Medical Student (2019-2023)
Emma started at the lab in August 2019, working as a research volunteer while in Cegep. She will be starting Medical school at McGill in the fall 2020. Currently, she is helping out with a research project focused on liquid biopsies, but she hopes to eventually get a personal research project.
Medical Student (2021-2023)
Qianqian (Chelsea) Zhou is a first year medical student at l’Université de Montréal and has an interest in the field of oncology. She joined the lab in July 2021 as a research volunteer. She is currently participating in a research project focusing on the effect of blue light on the tumorigenesis of uveal melanoma.
Undergrad Student (2022-2023)
Lily is a 3rd year undergraduate student pursuing a degree in Neuroscience at McGill University and has an interest in cancer. She joined the lab in September 2022. She is working on some cell culture techniques, and in the future, she is hoping to participate in projects about uveal melanoma and extracellular vesicles.
Postdoctoral Fellow (2020-2023)
Ruben graduated from the Monterrey Institute of Technology and Higher Education, where he completed a B. Eng. in Mechatronics and M.Sc. in Electronics. During his studies, he worked on several projects focused on biomedical and sustainable engineering. Upon completing his degrees, he worked in an engineering consulting firm for three years.
In 2016, he was awarded a full CONACyT-ETS scholarship for PhD graduate studies at École de technologie supérieure (ÉTS). During his PhD, he studied the production of next-generation nanomedicines on an industrial scale based on liposomes. Ruben graduated from ÉTS in 2020. The same year, he joined as a postdoctoral fellow in Dr. Julia Burnier’s laboratory. His research focuses on extracellular vesicles and their role in cancer metastasis. He is also interested in the production of EV-like liposomes using microfluidics to study cell-to-cell communication. The New Frontiers in Research grant funds this work. In his free time, Ruben likes practicing karate shotokan, learning photography, recreative biking, and traveling.
Postdoctoral Fellow (2023)
Daniel obtained his MD degree from Tongji University, where he received comprehensive training of medical knowledge and practice. During medical school, he was also actively engaged in basic and translational biomedical research including a fellowship at Harvard Medical School. After graduation, he practiced briefly as resident physician/gastroenterologist.
In 2018, he came to Canada for a PhD training at McGill University, his project was about the regulation of extracellular vesicles (EVs) and neutrophils in cancer progression and lymph node metastasis. During this training, he developed expertise in EV, innate immunity, gastroesophageal cancer, and the field tumour microenvironment. He has presented at multiple conferences and published multiple peer-reviewed articles. In 2022, he joined Dr. Julia Burnier’s lab as a postdoctoral fellow. He is currently working on the regulation of EVs in chemoresistance and developing new therapeutic tools using the bioengineering platforms in the lab.
MSc Student (2020-2022)
Chaymaa is a first-year master’s student at l’École de Technologie Supérieure (ÉTS) and she is doing her masters’ thesis under Dr Julia Burnier’s (RI-MUHC), Dr Rubén Lopez’s (RI-MUHC) and Dr. Vahé Nerguizian’s (ÉTS) supervision. She is currently working on the development of liposomes that mimic the naturally produced extracellular vesicles produced by different types of cancer cells. Chaymaa has a bachelor’s in Biomedical Engineering from Universidad Carlos III de Madrid (she graduated in 2019) and is eager to continue working in the field of nanotechnology applied to cancer research.
PhD Student (2018-2022)
Upon Prisca completed her master’s degree in experimental biology and working for two years in the pharmaceutical industry in Mexico City, she joined Dr. Julia Burnier’s Laboratory as a Ph.D. student in summer 2018. She is a scholarship recipient for Ph.D. studies by The National Council of Science and Technology of Mexico. She is currently working on liquid biopsy to predict tumor progression and metastasis in melanoma.
Undergrad Student (Volunteer 2021)
Caroline is a third year B.Sc student, in Microbiology and Immunology, at McGill University. She joined the lab in August 2021 as a research volunteer and is currently completing a 396 research project focused on detecting the presence of circulating tumour DNA in head and neck cancer patients.
MSc Student (2019-2021)
Alexander graduated from McGill University with a B.Sc. in Honours Anatomy and Cell biology. He completed an honours research project in Dr. Peter Metrakos’ laboratory, where he worked on determining the immunological landscape of liver metastases. From there he joined Dr. Julia Burnier’s laboratory to pursue a M.Sc. in pathology. His thesis focuses on characterizing the proteomic profile of extracellular vesicles obtained from malignant melanoma patient liquid biopsies. This work, funded by the FRQS award, seeks to optimize a minimally invasive method for earlier detection of metastasis through the identification of EV biomarkers.
Summer Intern (2021 Summer)
Charles is a fourth year mechanical engineering student completing his biomedical concentration at ÉTS. He had the opportunity to join Dre Burnier laboratory as an engineering intern for the 2021 summer. He is fascinated by the fields of healthcare and medical technologies, and he wants to be part of the solutions.
MSc Student (2018-2020)
Eva obtained B.Sc. from McGill, majored in Anatomy and Cell Biology. She joined Dr. Julia Burnier’s lab for completion of M.Sc. in Pathology. She worked on project characterizing GNAQ mutant melanocytes, and also investigating the effect of blue light exposure.
Medical Student (2019 Summer Student)
Rafaella is a medical student in Brazil who completed an observership in Dr Julia Burnier's lab. She obtained the opportunity by Dr. Julia, to come back as a researcher trainee the following year. Her research focuses on evaluating aqueous humor as a potential source of tumor derived material, that can be used for the diagnosis and monitoring of uveal melanoma.
CONTACT
Interested in joining our team?
For future position, please contact julia.burnier@mcgill.ca
Dr. Julia Burnier's Laboratory address:
RI-MUHC Glen site
1001 Boul. Décarie. E01.2123
Montreal QC H4A 3J1